Boutique Hotels & Resorts in Mission District from AU$198

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Our top choices for Mission District boutique hotels

Berkeley City Club

Berkeley City Club
2.5 star property
Telegraph District
8.8 out of 10, Excellent, (697)
"Wonderful, beautiful, old world hotel, right in the heart of bustling Berkeley. "
United States
Peter
Berkeley City Club

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2345)
"Great location"
United States
Deborah
The price is AU$273
includes taxes & fees
4 Jan - 5 Jan 2026
Hotel Zephyr San Francisco

Hotel Abri - Union Square

Hotel Abri - Union Square
3.5 star property
Union Square
8.6 out of 10, Excellent, (1000)
"Very nice hotel"
United States
Mariam
The price is AU$221
includes taxes & fees
6 Jan - 7 Jan 2026
Hotel Abri - Union Square

Palihotel San Francisco

Palihotel San Francisco
3.5 star property
Union Square
8.4 out of 10, Very good, (632)
"Great vibe here and the rooms and so cute . Excellent bar and bar staff . "
United States
Lana
The price is AU$198
includes taxes & fees
4 Jan - 5 Jan 2026
Palihotel San Francisco

Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1005)
"We enjoyed our stay, close to cable cars shopping dining bars "
United States
HALEY
The price is AU$257
includes taxes & fees
2 Jan - 3 Jan 2026
Hotel Emblem San Francisco

Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1221)
"Great place"
United States
Hugh
The price is AU$335
includes taxes & fees
26 Jan - 27 Jan 2026
Argonaut Hotel

The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1002)
"Very professional staff! Central located walking distance to everything!"
United States
Edmundo
The price is AU$329
includes taxes & fees
10 Jan - 11 Jan 2026
The Clancy, Autograph Collection by Marriott

Harbor Court Hotel

Harbor Court Hotel
4.0 star property
Downtown San Francisco
9.0 out of 10, Wonderful, (1005)
"Great location, vintage place & walkable everywhere"
United States
ROBERT
The price is AU$313
includes taxes & fees
2 Jan - 3 Jan 2026
Harbor Court Hotel

The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.0 out of 10, Wonderful, (1131)
"The staff was so fabulous, the hotel is gorgeous, and we are already having the best time!"
United States
Faith
The price is AU$262
includes taxes & fees
29 Jan - 30 Jan 2026
The Marker Union Square San Francisco

The Clift Royal Sonesta San Francisco

The Clift Royal Sonesta San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1368)
"clean, well appointed room in a good location."
United States
Susanna
The price is AU$294
includes taxes & fees
16 Jan - 17 Jan 2026
The Clift Royal Sonesta San Francisco
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Mission District Hotel Reviews

Frequently asked questions

What's there to see and do in Mission District?
The bars is one thing to enjoy while you're in the area. Favorite activities and sights around Mission District include Oracle Park, Pier 39 and San Francisco Bay. Some other things you might want to enjoy include SOMA Pilipinas, Victoria Theatre and SF Armory.
What's the best way to get to my boutique hotel in Mission District?
You have a few options for getting to Mission District. The closest major airport is San Francisco International Airport (SFO), which is located 10 mi (16.1 km) away. Take advantage of metro transport at 16th Street Mission Station, 24th Street Mission Station and Right Of Way/20th St Stop.

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