Cheap Flights from Cebu (CEB) to Kota Kinabalu (BKI)

View AU$289 flight on Mon, 29 Sep. 2025Opens in a new window

Popular airlines from Mactan - Cebu Intl. Airport (CEB) to Kota Kinabalu Intl. Airport (BKI)

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Cheap Flights from Cebu (CEB) to Kota Kinabalu (BKI)

Prices were available within the past 7 days for one-way flights and round trip tickets for the period specified. Prices and availability are subject to change. Additional terms apply.

Philippine Airlines
Sat, 4 Oct. - Sat, 11 Oct.
CEB
Cebu City
BKI
Kota Kinabalu
AU$750 Return, found 2 days ago
AU$750
Return
found 2 days ago
Select Philippine Airlines flight, departing Sat, 4 Oct. from Cebu City to Kota Kinabalu, returning Sat, 11 Oct., priced at AU$750 found 2 days ago
Cathay Pacific
Wed, 18 Mar. - Wed, 25 Mar.
CEB
Cebu City
BKI
Kota Kinabalu
AU$786 Return, found 6 days ago
AU$786
Return
found 6 days ago
Select Cathay Pacific flight, departing Wed, 18 Mar. from Cebu City to Kota Kinabalu, returning Wed, 25 Mar., priced at AU$786 found 6 days ago
Cathay Pacific
Wed, 18 Mar. - Wed, 25 Mar.
CEB
Cebu City
BKI
Kota Kinabalu
AU$825 Return, found 6 days ago
AU$825
Return
found 6 days ago
Select Cathay Pacific flight, departing Wed, 18 Mar. from Cebu City to Kota Kinabalu, returning Wed, 25 Mar., priced at AU$825 found 6 days ago
Cathay Pacific
Wed, 18 Mar. - Wed, 25 Mar.
CEB
Cebu City
BKI
Kota Kinabalu
AU$849 Return, found 6 days ago
AU$849
Return
found 6 days ago
Select Cathay Pacific flight, departing Wed, 18 Mar. from Cebu City to Kota Kinabalu, returning Wed, 25 Mar., priced at AU$849 found 6 days ago
Singapore Airlines
Sat, 4 Oct. - Sat, 11 Oct.
CEB
Cebu City
BKI
Kota Kinabalu
AU$883 Return, found 2 days ago
AU$883
Return
found 2 days ago
Select Singapore Airlines flight, departing Sat, 4 Oct. from Cebu City to Kota Kinabalu, returning Sat, 11 Oct., priced at AU$883 found 2 days ago
Cathay Pacific
Wed, 18 Mar. - Wed, 25 Mar.
CEB
Cebu City
BKI
Kota Kinabalu
AU$887 Return, found 6 days ago
AU$887
Return
found 6 days ago
Select Cathay Pacific flight, departing Wed, 18 Mar. from Cebu City to Kota Kinabalu, returning Wed, 25 Mar., priced at AU$887 found 6 days ago
Singapore Airlines
Sat, 4 Oct. - Sat, 11 Oct.
CEB
Cebu City
BKI
Kota Kinabalu
AU$946 Return, found 2 days ago
AU$946
Return
found 2 days ago
Select Singapore Airlines flight, departing Sat, 4 Oct. from Cebu City to Kota Kinabalu, returning Sat, 11 Oct., priced at AU$946 found 2 days ago
Flight from Cebu to Kota Kinabalu route information
Origin airport
Mactan - Cebu Intl.
Destination airport
Kota Kinabalu Intl.
Return price
AU$750
Distance
993 km

Your quick guide to flights from Cebu to Kota Kinabalu

Pick up great flights from Cebu to Kota Kinabalu

With Expedia, you have your pick of flights a day with 20 airlines covering flights from Cebu to Kota Kinabalu. Whether you’re on a business trip, a family holiday or a luxury break, just enter your travel dates, hit search then check out your choice of flights. Select from return, one way or multi-city flights, and use the advance search tool if you want a direct or refundable flight. You can narrow your search to show you just your preferred cabin class and airline, too. It’s all easy. You can book direct flights from Cebu to Kota Kinabalu that take around hours.

Find cheap flights from Cebu to Kota Kinabalu

From the great flight deals with prices currently ranging from AU$750 to AU$946, you can choose to see the cheapest flights first. Generally, you can book the cheapest flights from Cebu to Kota Kinabalu around 4 to 6 weeks in advance. If your travel dates are flexible, try to avoid weekends and peak seasons – when you are more likely to grab the lowest prices. Even last minute, there are some impressive deals. The cheapest time to fly to Kota Kinabalu is normally in October.

Reasons to book your flight from Cebu to Kota Kinabalu with Expedia

Expedia makes it easy to find, book, and travel, with everything you need all in one place. When you enter your travel details, find fantastic deals just for you on flight tickets from Cebu to Kota Kinabalu across all the main airline carriers, so you can save time, dollars, and hassle finding the perfect flight. If you think your plans could change, choose refundable flights so any changes won’t cost you more. Book your flight to Kota Kinabalu right now and, if you join Expedia Rewards, you earn points this time and every time you travel with Expedia.

Frequently asked questions

How much is a flight from Mactan - Cebu Intl. Airport to Kota Kinabalu International Airport?
Within the past 7 days on Expedia, for flights departing within the next year, the lowest price advertised for a round-trip journey from Mactan - Cebu Intl. Airport to Kota Kinabalu International Airport was AU$750. Fares this good don't hang around forever, so make sure you book yours today. Prices and availability are subject to change. Additional terms apply.
Do I need to pay a cancellation fee if I cancel my flight from Mactan - Cebu Intl. Airport (CEB) to Kota Kinabalu Intl. Airport (BKI)?
This differs from airline to airline, as each one has its own set of terms and conditions. Head to the Customer Service Portal, where you'll find simple instructions on how to cancel your flight online.
How do I find cheap flights from Mactan - Cebu Intl. Airport to Kota Kinabalu Intl. Airport (BKI) that have flexible change policies?
Many airlines offer the option to reschedule your flight without a change fee. All you pay is the difference between the original flight and the new flight. When you're searching for Mactan - Cebu Intl. Airport (CEB) to BKI flights, you'll see a "no change fees" filter for you to select.
How far is the flight from Mactan - Cebu Intl. Airport (CEB) to Kota Kinabalu Intl. Airport (BKI)?
With a flight distance of 1 000 kilometres, it's just a hop from CEB to Kota Kinabalu International Airport. It might be a quick flight, but it's still worth bringing a good book to read.
Which airlines fly direct from Mactan - Cebu Intl. Airport (CEB) to Kota Kinabalu Intl. Airport (BKI)?
There are no direct flights, so you'll need to make at least one stop between CEB and Kota Kinabalu Intl. Airport (BKI). Make the most of the layover time to stretch your legs and enjoy some personal space.
Are Mactan - Cebu Intl. Airport to BKI flight tickets cheaper when they're purchased at the last minute?
Flight prices go up and down like a yo-yo, so not always. While last-minute flight deals between CEB and BKI are of course possible, it's also a good idea to keep a close eye on prices well before you fly. In fact, some carriers publish their prices up to 12 months before the departure date. Expedia is continuously updating the best airfare bargains around, so keep checking back and be ready to pounce when the price dips.

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