Harbor Island Hotels, San Diego

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Our top choices for Harbor Island hotels

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
Harbor Island
8.4 out of 10, Very good, (3,557 reviews)
"My family and I truly enjoyed our stay."
United States
Beverly A
The price is AU$331
includes taxes & fees
5 July - 6 July
Sheraton San Diego Resort

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
Harbor Island
8.8 out of 10, Excellent, (1,212 reviews)
"I enjoyed to fresh sent of the hotel and the very friendly workers :)"
United States
christina
The price is AU$266
includes taxes & fees
14 June - 15 June
Hilton San Diego Airport/Harbor Island

Holiday Inn Express Hotel & Suites San Diego Otay Mesa by IHG

Holiday Inn Express Hotel & Suites San Diego Otay Mesa by IHG
2.5 star property
31.2 km from Harbor Island
8.2 out of 10, Very good, (1,755 reviews)
"Clean, friendly staff, great breakfast!!"
United States
Flor
The price is AU$226
includes taxes & fees
14 June - 15 June
Holiday Inn Express Hotel & Suites San Diego Otay Mesa by IHG

Ayres Hotel San Diego South - Chula Vista

Ayres Hotel San Diego South - Chula Vista
3.0 star property
25.2 km from Harbor Island
9.8 out of 10, Exceptional, (1,103 reviews)
"Nice place good food for breakfast 👍"
United States
Paul
The price is AU$334
includes taxes & fees
6 July - 7 July
Ayres Hotel San Diego South - Chula Vista

Ramada by Wyndham San Diego Poway Miramar

Ramada by Wyndham San Diego Poway Miramar
2.0 star property
28.7 km from Harbor Island
7.2 out of 10, Good, (1,021 reviews)
"Nice place to stay."
United States
Jacquie
The price is AU$193
includes taxes & fees
14 June - 15 June
Ramada by Wyndham San Diego Poway Miramar

Best Western San Diego/Miramar Hotel

Best Western San Diego/Miramar Hotel
2.5 star property
20.3 km from Harbor Island
8.0 out of 10, Very good, (1,377 reviews)
"Great stay Really close to the cut water brewery!"
United States
Jessica
The price is AU$207
includes taxes & fees
14 June - 15 June
Best Western San Diego/Miramar Hotel

Best Western Plus La Mesa San Diego

Best Western Plus La Mesa San Diego
2.5 star property
21 km from Harbor Island
8.4 out of 10, Very good, (1,006 reviews)
"We enjoyed our stay."
United States
Lauren
The price is AU$230
includes taxes & fees
14 June - 15 June
Best Western Plus La Mesa San Diego

Lafayette Hotel & Club

Lafayette Hotel & Club
4.0 star property
7 km from Harbor Island
9.4 out of 10, Exceptional, (1,698 reviews)
"Lovely hotel, very aesthetic place"
United States
Roxana
The price is AU$406
includes taxes & fees
16 June - 17 June
Lafayette Hotel & Club

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 6 km from Harbor Island
8.6 out of 10, Excellent, (1,468 reviews)
"Great resort!"
United States
Jean-Michelle
The price is AU$546
includes taxes & fees
14 June - 15 June
San Diego Mission Bay Resort

Old Town Inn

Old Town Inn
2.5 star property
3 km from Harbor Island
9.2 out of 10, Wonderful, (1,894 reviews)
"Breakfast was good, rooms were decent."
United States
Andrea
The price is AU$253
includes taxes & fees
29 June - 30 June
Old Town Inn

California Suites Hotel

California Suites Hotel
2.0 star property
12.4 km from Harbor Island
7.8 out of 10, Good, (2,621 reviews)
"Great place to stay. Nice staff, pretty affordable for the area and nice pool & spa"
United States
Kimberly
The price is AU$145
includes taxes & fees
9 June - 10 June
California Suites Hotel

The Rambler Hotel

The Rambler Hotel
3.0 star property
13.9 km from Harbor Island
9.0 out of 10, Wonderful, (2,158 reviews)
"Cool vibe in an easy spot to get on and off the highway."
United States
Jami
The price is AU$179
includes taxes & fees
9 June - 10 June
The Rambler Hotel

Holiday Inn Express Hotel & Suites San Diego-Sorrento Valley by IHG

Holiday Inn Express Hotel & Suites San Diego-Sorrento Valley by IHG
2.5 star property
19.1 km from Harbor Island
8.8 out of 10, Excellent, (1,008 reviews)
"Breakfast was yummy and our kids liked the different choices. Everything was clean and staff were friendly. We loved the 24/7 coffee bar!!"
United States
Verenice
The price is AU$315
includes taxes & fees
5 July - 6 July
Holiday Inn Express Hotel & Suites San Diego-Sorrento Valley by IHG

Comfort Inn Chula Vista San Diego South

Comfort Inn Chula Vista San Diego South
2.5 star property
15.8 km from Harbor Island
8.2 out of 10, Very good, (1,541 reviews)
"Everything was excellent. Room, breakfast location and staff. This was our second time staying here and we'll be back."
United States
Chris
The price is AU$198
includes taxes & fees
28 June - 29 June
Comfort Inn Chula Vista San Diego South

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
0.7 km from Harbor Island
9.2 out of 10, Wonderful, (1,727 reviews)
"Good location, clean room and nice staff. A great place to stay."
United States
Patricia
The price is AU$280
includes taxes & fees
28 June - 29 June
Hampton Inn & Suites San Diego Airport Liberty Station

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
23.1 km from Harbor Island
8.8 out of 10, Excellent, (1,298 reviews)
"Room is nice, clean, & breakfast is good. We always stay here when in the area."
United States
Travis
The price is AU$197
includes taxes & fees
14 June - 15 June
Best Western Americana Inn

Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
11.6 km from Harbor Island
9.2 out of 10, Wonderful, (3,876 reviews)
"Great stay"
United States
Cameron
The price is AU$280
includes taxes & fees
28 June - 29 June
Best Western Plus Marina Gateway Hotel

Valli Hi Motel

Valli Hi Motel
2.5 star property
23.2 km from Harbor Island
8.4 out of 10, Very good, (1,017 reviews)
"Great place to stay."
United States
Allan
The price is AU$137
includes taxes & fees
10 June - 11 June
Valli Hi Motel

Embassy Suites by Hilton San Diego La Jolla

Embassy Suites by Hilton San Diego La Jolla
4.0 star property
University City, 16.6 km from Harbor Island
8.8 out of 10, Excellent, (1,925 reviews)
"Great location and very comfortable and spacious hotel room"
United States
Carmen
The price is AU$374
includes taxes & fees
21 June - 22 June
Embassy Suites by Hilton San Diego La Jolla

Marriott Marquis San Diego Marina

Marriott Marquis San Diego Marina
4.0 star property
4.3 km from Harbor Island
9.2 out of 10, Wonderful, (2,174 reviews)
"Great stay"
United States
Jean
The price is AU$625
includes taxes & fees
5 July - 6 July
Marriott Marquis San Diego Marina
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Our guide on where to stay in Harbor Island

Find the best Harbor Island areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and USS Midway Museum are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

Get to Pacific Beach after the sun goes down because this is the place to be in San Diego for partying.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

Mission Bay

If you're spending some time in Mission Bay, Mission Bay and Mission and Pacific Beaches are top sights worth seeing.

Top Harbor Island Hotel Reviews

Frequently asked questions

What's it like in Harbor Island?
Harbor Island is a scenic neighbourhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.
Where is the best place to stay in Harbor Island?
Based on our traveller data, Sheraton San Diego Resort is one of the top choices for your stay in Harbor Island. This hotel is a short 1-minute walk from San Diego Bay, and it offers a marina and 3 outdoor pools.
How many hotels should I expect to find in the Harbor Island area?
Book one of Expedia's 6 hotels and other accommodation options in Harbor Island and start exploring everything San Diego has to offer.
If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?
Yes, the majority of hotel reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and get a refund within 24 hours of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to view the top deals on offer in Harbor Island.
What is there to do around this San Diego neighbourhood?
San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, make sure that you visit other sights such as USS Midway Museum or Port of San Diego.

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