A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Boutique Hotels & Resorts in San Juan Island from AU$182

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Check availability on San Juan Island Boutique Hotels

Tonight
23 Aug - 24 Aug
Tomorrow
24 Aug - 25 Aug
Next weekend
28 Aug - 30 Aug
In two weeks
4 Sept - 6 Sept
No exact matches found, but these alternatives could be just right

Recommended hotels in San Juan Island

1. The Orca Inn

The Orca Inn
Friday Harbor
United States
Lydia
AU$182
includes taxes & fees
31 Aug - 1 Sept
The Orca Inn

2. Discovery Inn

Discovery Inn
Friday Harbor
United States
Paul
AU$374
includes taxes & fees
14 Sept - 15 Sept
Discovery Inn

3. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Nicole
AU$401
includes taxes & fees
7 Sept - 8 Sept
Earthbox Inn & Spa

4. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
Angela
AU$436
includes taxes & fees
1 Sept - 2 Sept
Trumpeter Inn

5. Friday Harbor Suites

Friday Harbor Suites
Friday Harbor
United States
Ken
AU$327
includes taxes & fees
20 Sept - 21 Sept
Friday Harbor Suites

6. Bird Rock Hotel

Bird Rock Hotel
Friday Harbor
United States
Gloria
AU$301
includes taxes & fees
26 Aug - 27 Aug
Bird Rock Hotel

7. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
AU$417
includes taxes & fees
21 Sept - 22 Sept
Roche Harbor Resort

8. Snug Harbor Resort

Snug Harbor Resort
Friday Harbor
United States
Sarah
AU$605
includes taxes & fees
7 Sept - 8 Sept
Snug Harbor Resort

9. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Robert
AU$707
includes taxes & fees
20 Sept - 21 Sept
Friday Harbor House

10. Tucker House Inn

Tucker House Inn
Friday Harbor
United States
ZACHARY
AU$392
includes taxes & fees
8 Sept - 9 Sept
Tucker House Inn
View all properties

Top San Juan Island Hotel Reviews

Bird Rock Hotel

Bird Rock Hotel

10/10 Excellent
"Very cute old hotel 2 blocks from ferry. No AC in our room but we didn’t need it with open windows and ceiling fan! Having no staff there wasn’t a problem and they have dishes and a microwave in the lobby for making oatmeal or heating up leftovers. They set out lemonade and cookies in the afternoon. The only thing that I would suggest thats missing to have in the lobby would be a water cooler/filter refillable station. PARKING: We parked for the day up about 2 blocks in the 10 hr lot, then around 4 or 5, we’d bring it back down to street parking in the evening and in the am, take the car back to the free 10 hr lot not far away."
Steven 3-night trip
Posted 11 days ago
Bird Rock Hotel

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