Search San Juan Island Cottage Accommodations

    calendar shield illustration

    Change your mind

    Book hotels with free cancellation
    deals illustration

    Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in
    bed illustration

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
12 Sept - 14 Sept
In one month
26 Sept - 28 Sept
In two months
24 Oct - 26 Oct
In three months
21 Nov - 23 Nov

Featured Cottages in San Juan Island

Our top choices for San Juan Island cottages

Cottage by the Sea Su
Outdoor dining

Cottage by the Sea Su

9.6 out of 10, Exceptional, (144)
"Great location that accepts pets. Gorgeous view that never gets old!"
The price is AU$408
includes taxes & fees
1 Sept - 2 Sept
Cottage by the Sea Su
Cozy cottage, outdoor space & convenient location
Fridge, microwave, oven, stovetop

Cozy cottage, outdoor space & convenient location

9.4 out of 10, Exceptional, (54)
"Wonderful overall. Property was perfect for my family of 4 for a long weekend in and around Anacortes. Very walkable location. Kitchen, bath, beds, side yard were great. "
The price is AU$569
includes taxes & fees
5 Sept - 6 Sept
Cozy cottage, outdoor space & convenient location
@ Marbella Lane - Seas the Bay Sanctuary
House (3 Bedrooms) | Beach/ocean view

@ Marbella Lane - Seas the Bay Sanctuary

3.0 star property
The price is AU$738
includes taxes & fees
29 Sept - 30 Sept
@ Marbella Lane - Seas the Bay Sanctuary
@ Marbella Lane Wave HS W/ev Charger, Oceanfront!
Front of property - evening/night

@ Marbella Lane Wave HS W/ev Charger, Oceanfront!

3.0 star property
The price is AU$853
includes taxes & fees
29 Sept - 30 Sept
@ Marbella Lane Wave HS W/ev Charger, Oceanfront!
Dog-Friendly Cottage with hot tub, kayaks, e-bike
Beach nearby

Dog-Friendly Cottage with hot tub, kayaks, e-bike

9.8 out of 10, Exceptional, (27)
"Great stay. Beautiful house, wonderful location. Extremely grateful for the hosts local recommendations, especially Matia!"
The price is AU$902
includes taxes & fees
18 Sept - 19 Sept
Dog-Friendly Cottage with hot tub, kayaks, e-bike
Waterfront cottage with tidelands, creek and waterfall!
Property grounds

Waterfront cottage with tidelands, creek and waterfall!

9.8 out of 10, Exceptional, (10)
"Beautiful setting, lots of amenities in the house. "
The price is AU$1,335
includes taxes & fees
27 Sept - 28 Sept
Waterfront cottage with tidelands, creek and waterfall!
Waterfront Cottage on a Farm and Animal Sanctuary.
Property grounds

Waterfront Cottage on a Farm and Animal Sanctuary.

The price is AU$1,095
includes taxes & fees
3 Sept - 4 Sept
Waterfront Cottage on a Farm and Animal Sanctuary.
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top San Juan Island Hotel Reviews

Find out more about San Juan Island

Find out more about San Juan Island

San Juan Island Cottages information

Number of reviews
112
Accommodation
64 Cottages
Lowest Price
AU$408
Highest Price
AU$1,335

Explore a world of travel with Expedia

Explore a world of travel with Expedia