A lighthouse on a rocky coastline with the ocean in the foreground.

Apartments in San Juan Islands

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
In two months
In three months
In four months

Our top choices for San Juan Islands apartments

Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

Madrona Suite - Summer on Orcas Island- rest where sea meets stillness
Eastsound
10.0 out of 10, Exceptional, (27 reviews)
"Place was nice and cozy good view and hosts were great to interact with will definitely book if in area again "
United States
Alejandro F.
The price is AU$594
includes taxes & fees
25 July - 26 July
Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

Dog-friendly studio w/ kitchenette, WiFi, yard & fire pit

Dog-friendly studio w/ kitchenette, WiFi, yard & fire pit
Orcas Island
9.2 out of 10, Wonderful, (76 reviews)
"Peaceful and quiet spot in the woods yet near the Ferry and Lake Killebrew! The owners art is on display. Another wonderful relaxing stay for this return customer."
United States
Joshua F.
The price is AU$449
includes taxes & fees
15 July - 16 July
Dog-friendly studio w/ kitchenette, WiFi, yard & fire pit

Heart of Deer Harbor - Harbormaster House

Heart of Deer Harbor - Harbormaster House
Deer Harbor
10.0 out of 10, Exceptional, (4 reviews)
"Loved the house! Beautiful view, nicely decorated, very comfortable. Will definitely stay here again!"
United States
Cndi B.
The price is AU$1,428
includes taxes & fees
20 July - 21 July
Heart of Deer Harbor - Harbormaster House

Studio Unit with Views of Hales Passage and Mt Baker

Studio Unit with Views of Hales Passage and Mt Baker
Lummi Island
10.0 out of 10, Exceptional, (120 reviews)
"The place was clean and comfortable, and the view from the little deck was awesome. We enjoyed our stay very much."
United States
Charles S.
The price is AU$249
includes taxes & fees
14 July - 15 July
Studio Unit with Views of Hales Passage and Mt Baker

900 square foot Studio loft in Fairhaven

900 square foot Studio loft in Fairhaven
South Bellingham
10.0 out of 10, Exceptional, (75 reviews)
"We enjoyed our stay. The loft was super clean, cozy and had everything we needed."
United States
Jamie
The price is AU$420
includes taxes & fees
14 July - 15 July
900 square foot Studio loft in Fairhaven

Sunny Island Cliff Side Views

Sunny Island Cliff Side Views
Anacortes
9.8 out of 10, Exceptional, (52 reviews)
"We were very comfortable and had a great stay. The kitchen was very well equipped and all was immaculately clean."
United States
James E.
The price is AU$547
includes taxes & fees
16 July - 17 July
Sunny Island Cliff Side Views

Downstairs@TheVictorian: Downtown and Dog-Friendly

Downstairs@TheVictorian: Downtown and Dog-Friendly
York
10.0 out of 10, Exceptional, (25 reviews)
"Great location, cute yard, and a very nice kitchen :)"
United States
David K.
Downstairs@TheVictorian: Downtown and Dog-Friendly

The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive
Bellingham
10.0 out of 10, Exceptional, (22 reviews)
"Great stay near Bellingham"
United States
Ken L.
The price is AU$417
includes taxes & fees
14 July - 15 July
The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

Welcome to Tranquility Place, Whidbey Island

Welcome to Tranquility Place, Whidbey Island
Oak Harbor
10.0 out of 10, Exceptional, (11 reviews)
"The hostess was very peompt in communication, the amenities were plentiful and in good condition. We are looking at relocating to the area and will definitely recommend to family "
United States
Morganna F.
The price is AU$320
includes taxes & fees
14 July - 15 July
Welcome to Tranquility Place, Whidbey Island

Studio with covered deck and Birch Bay View

Studio with covered deck and Birch Bay View
Blaine
7.6 out of 10, Good, (4 reviews)
"Great weather and great locatio6"
United States
michael c.
The price is AU$285
includes taxes & fees
14 July - 15 July
Studio with covered deck and Birch Bay View

Full Apt with large kitchen across the street from the beach.

Full Apt with large kitchen across the street from the beach.
Blaine
10.0 out of 10, Exceptional, (3 reviews)
"This is a very comfortable apartment with an amazingly stocked kitchen. Everything we needed was there. It is steps from the bay, and a quick walk to the state park. I would definitely stay here again!"
United States
Carla G.
The price is AU$382
includes taxes & fees
17 July - 18 July
Full Apt with large kitchen across the street from the beach.

Upstairs at TheVictorian - Lush, Walkable, and Dog-Friendly Retreat - Steps from Downtown Bellingham

Upstairs at TheVictorian - Lush, Walkable, and Dog-Friendly Retreat - Steps from Downtown Bellingham
York
9.8 out of 10, Exceptional, (25 reviews)
"A sweet house with a great location. We enjoyed our stay!"
United States
Greg R.
The price is AU$598
includes taxes & fees
28 July - 29 July
Upstairs at TheVictorian - Lush, Walkable, and Dog-Friendly Retreat - Steps from Downtown Bellingham

Downtown Bellingham Apartment

Downtown Bellingham Apartment
Lettered Streets
10.0 out of 10, Exceptional, (78 reviews)
"Everything was great ! We loved the place and the location!"
United States
Sharon K.
The price is AU$347
includes taxes & fees
9 Aug - 10 Aug
Downtown Bellingham Apartment

Upstairs at Thevictorian - Lush Walkable and Dog-friendly Retreat - Steps From Downtown Bellingham

Upstairs at Thevictorian - Lush Walkable and Dog-friendly Retreat - Steps From Downtown Bellingham
2.0 star property
York
10.0 out of 10, Exceptional, (1 review)
"Spotless"
United States
Henry
The price is AU$694
includes taxes & fees
28 July - 29 July
Upstairs at Thevictorian - Lush Walkable and Dog-friendly Retreat - Steps From Downtown Bellingham

Luxury Maple Beach Waterfront King apartment-Ground Floor only 50 feet to Beach.

Luxury Maple Beach Waterfront King apartment-Ground Floor only 50 feet to Beach.
Point Roberts
10.0 out of 10, Exceptional, (1 review)
"Clean and perfect for us - best view too . Bed was comfortable and beautiful walk in shower - also an area to lay out back to tan as well . Enjoyed our time"
United States
marie h.
The price is AU$300
includes taxes & fees
19 July - 20 July
Luxury Maple Beach Waterfront King apartment-Ground Floor only 50 feet to Beach.

Walk to The Oyster Bar: Chuckanut Dr Retreat!

Walk to The Oyster Bar: Chuckanut Dr Retreat!
3.5 star property
Bow
The price is AU$512
includes taxes & fees
7 Aug - 8 Aug
Walk to The Oyster Bar: Chuckanut Dr Retreat!

Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!
Anacortes
10.0 out of 10, Exceptional, (33 reviews)
"Check in was quick and easy and the property was just like the photos! We had a great time staying in this cozy studio. "
United States
Violet N.
The price is AU$223
includes taxes & fees
24 July - 25 July
Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

Home Away From Home… for you and for your pets!

Home Away From Home… for you and for your pets!
Oak Harbor
9.0 out of 10, Wonderful, (17 reviews)
"Beautiful place and gorgeous view. I would like to stay there again next year"
United States
Ina T.
The price is AU$750
includes taxes & fees
14 July - 15 July
Home Away From Home… for you and for your pets!

Nestled across from beach, find a versatile studio.

Nestled across from beach, find a versatile studio.
Blaine
The price is AU$288
includes taxes & fees
16 July - 17 July
Nestled across from beach, find a versatile studio.

Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA

Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA
Ferndale
8.6 out of 10, Excellent, (4 reviews)
"Cameron was super friendly and accommodating. The place was just what we needed for one night. It was private and well taken care of. Looking forward to coming back. "
United States
Josefine V.
The price is AU$191
includes taxes & fees
16 July - 17 July
Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Top San Juan Islands Hotel Reviews

Find out more about San Juan Islands

San Juan Islands Apartments information

Number of reviews
549
Accommodation
27 Apartments
Lowest Price
AU$191
Highest Price
AU$1,428

Explore a world of travel with Expedia