Ayios Thomas Hotel & Accommodation Deals 2026 from AU$56 - Compare prices by date

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Our top choices for Ayios Thomas hotels

A pool with a water feature, surrounded by chairs and trees.

A modern hotel room with a bed, a seating area, a TV mounted on the wall, and a view of the outdoors.

A restaurant interior with wooden chairs, white tablecloths, and a bottle of wine on the table.

A pool surrounded by lounge chairs and a building with multiple balconies.

1. Idi Hotel

Faistos

Erin

AU$126

includes taxes & fees

26 Sept - 27 Sept

A stone building with a wooden door and a small archway. There is a tree with purple flowers in front of the building.

A courtyard with a rustic stone wall, a wooden door, and a small table.

A rustic room with a wooden staircase, a bed with a patterned bedspread, a dining table, and a painting on the wall.

An aerial view of a coastal area with a beach, a road, and a row of buildings with a pool.

2. Traditional Cretan Houses

Heraklion

Eric

AU$82

includes taxes & fees

12 Oct - 13 Oct

A swimming pool with lounge chairs and a gazebo, surrounded by a stone wall and a mountain backdrop.

A dining table with a view of a mountainous landscape through a large window.

A bedroom with a bed, a wooden headboard, and a view of an outdoor seating area through large windows.

A dining area with a table set for two, a sofa, and a view of the outdoors.

3. Aetovigla Traditional Guest Houses

Malevizi

Monica

AU$159

includes taxes & fees

1 Oct - 2 Oct

A modern bedroom with a large bed, a built-in sink, and a mirror.

A person sitting on a bean bag chair with a wooden table beside them, a cup, and a straw hat on the table.

A modern two-story house with a balcony, outdoor seating, and a hanging chair.

A bar with wooden shelves stocked with various bottles, a bartender, and rustic decor.

4. Manili Boutique Suites & Villas, an SLH Hotel

Archanes-Asterousia

Frederik

AU$208

includes taxes & fees

13 Oct - 14 Oct

A swimming pool with lounge chairs, surrounded by trees and a mountainous backdrop.

A modern kitchen with a central island, a dining area with a table and chairs, and a staircase leading to another level.

An outdoor seating area with wicker chairs and tables, surrounded by trees and greenery.

An aerial view of a residential area with multiple houses, a swimming pool, and well-lit pathways.

5. Eliathos Hillside Retreat

Archanes-Asterousia

louise

AU$168

includes taxes & fees

21 Sept - 22 Sept

A hotel entrance with a clear sign reading "sofia hotel".

A pool area with lounge chairs, a lifebuoy, and outdoor seating.

A restaurant with outdoor seating by a pool, wooden tables and chairs, and a view of the pool area.

A spacious lobby with multiple seating areas, a fireplace, and a staircase leading to upper floors.

6. Sofia Hotel

Nea Alikarnassos

Alan

AU$125

includes taxes & fees

20 Sept - 21 Sept

A reception area with a sign for Gallery Suites, surrounded by tables and chairs, and a green wall with plants.

A modern room with a sliding glass door leading to a balcony with a chair and a table.

A modern hotel room with a large bed, a desk, a TV, and a view of the outdoors.

A stone building with a neon sign reading "démodé Café Bistro" and a wooden bench in the foreground.

7. Chapter 02 Gallery Suites

Heraklion

Kimberly

AU$143

includes taxes & fees

9 Oct - 10 Oct

A modern living room with a grey sofa, a coffee table with decorative items, a black partition, and a view of a bedroom with a bed and a wardrobe.

A modern living room with a grey sofa, a white coffee table, and a potted plant.

A hotel entrance with a sign reading "STAY365 APART HOTEL" and vertical wooden slats.

A modern bedroom with a large bed, a nightstand, a small table with a plant, and a balcony with a view of the city.

8. Stay 365 Heraklion Apart Hotel

Heraklion

Ioannis

AU$116

includes taxes & fees

7 Oct - 8 Oct

A room with a bed, a chair, a balcony, and a window with curtains.

A restaurant with high ceilings, pendant lighting, and a central bar area. Tables are arranged for dining, and there are stools near the bar.

A hotel room with a bed, a desk with a computer, a chair, a window, and a door leading to a balcony.

A multi-story hotel with balconies, a parking lot, and a view of the cityscape.

9. Asterion Hotel

Nea Alikarnassos

Antreas

AU$131

includes taxes & fees

13 Oct - 14 Oct

A balcony with a table and chairs, overlooking a coastal landscape with a clear view of the sea and distant hills.

A view through a window with a clear blue sky, a flag, and a pathway leading to a beach.

A spacious lobby with a high ceiling, ornate chandeliers, and a stone fireplace.

A swimming pool with clear water reflecting the sun.

10. Karteros Hotel

Hersonissos

Pantelis

AU$100

includes taxes & fees

7 Oct - 8 Oct

A modern outdoor seating area with wicker furniture, large windows offering a city view, and a ceiling with recessed lighting.

An outdoor patio with tables and chairs, a view of the cityscape, and a building with a modern design.

A hotel room with a large bed, a desk with a computer, a TV, and a shower area.

A spacious indoor area with multiple tables and chairs, large windows offering views of the city, and a ceiling with exposed beams.

11. Marvel Deluxe Rooms

Nea Alikarnassos

Daniela

AU$132

includes taxes & fees

20 Sept - 21 Sept

An arched doorway leading to a room with a tiled floor and a candle in a window.

A dining area with a round table, two chairs, and a candle. There are two arched doorways leading to another room. The walls are made of stone, and the floor has a checkered pattern.

A hotel room with a large bed, a green armchair, a small table with a lamp, and a window with curtains.

A multi-story building with a balcony, wooden railings, and a staircase.

12. Porta Medina Boutique Hotel - Adults Only

Heraklion

Alexandre

AU$145

includes taxes & fees

13 Oct - 14 Oct

An infinity pool with lounge chairs and a view of the sea at sunset.

A modern hotel room with a bed, a sofa, a small table, and a balcony with a view of the sea.

A person seated at a table with a meal and a drink, overlooking a beach with the ocean and a red car in the background.

A modern living room with a sofa, two wicker chairs, a small table with a bowl and book, and a view of the ocean through a sliding glass door.

13. RoccaMare Heraklion - Handwritten Collection

Heraklion

Tina

AU$199

includes taxes & fees

18 Sept - 19 Sept

A staircase with blue lighting leading to a building entrance.

A modern interior with a seating area, a staircase, and a view of the outdoor patio.

A restaurant with wooden furniture, hanging light fixtures, and a view of a historic building.

A modern interior with a central corridor, wooden flooring, and a bench along the right wall.

14. Ibis Styles Heraklion Central

Heraklion

Claudia

AU$178

includes taxes & fees

13 Sept - 14 Sept

A modern interior with a central staircase, a ceiling mural, and a chandelier.

A buffet setup with various food items and a decorative centerpiece.

An outdoor dining area with tables set for two, overlooking a coastal view.

A balcony with a white canopy overlooking a pool and the sea.

15. GDM Megaron Historical Monument Hotel

Heraklion

Dale

AU$279

includes taxes & fees

12 Oct - 13 Oct

A modern hotel room with a bed, a desk with a chair, a large window with curtains, a wooden wardrobe, and a black basin on the counter.

A modern reception area with a marble wall, a reception desk, and seating arrangements.

A modern hotel with a two-story structure, large windows, and a visible restaurant area with outdoor seating.

A modern room with a sofa, a round coffee table with a plant, and a sliding door.

16. Anesea City

Nea Alikarnassos

George

AU$237

includes taxes & fees

28 Sept - 29 Sept

A modern living room with a sofa, coffee table, and dining area. There is a hallway leading to another room.

A modern living room with a sofa, a coffee table, and a chair. There is a sliding glass door leading to an outdoor area with a table and chairs. A plant is on the coffee table, and a book is on the table.

A modern kitchen with wooden cabinets, a black countertop, and a coffee machine.

A man lying on a poolside lounge chair with a checkered pattern.

17. 3 Pines Design Living

Heraklion

Todd

AU$135

includes taxes & fees

13 Oct - 14 Oct

A modern hotel with a central swimming pool, multiple balconies, and outdoor seating areas.

A modern hotel lobby with a clean, tiled floor, large potted plants, and a reception desk in the center.

An outdoor dining area with wicker chairs and tables, potted plants, and a modern building in the background.

A buffet setup with various food items and a coffee machine.

18. Galaxy Hotel Iraklio

Heraklion

Andre

AU$200

includes taxes & fees

6 Oct - 7 Oct

A balcony with a view of the ocean, a table, and a chair.

A room with a view of the sea, a wooden desk with a plant, a decorative item, and a couch with a cushion.

A coastal view with a historic fort, boats, and a clear sky.

A breakfast table with a variety of food items, including fruits, pastries, and a vase with flowers.

19. Kronos Hotel

Heraklion

Tayfun

AU$129

includes taxes & fees

7 Oct - 8 Oct

A multi-story building with balconies, a ground-level entrance, and a view of the cityscape in the background.

A rooftop terrace with two blue lounge chairs, a small table, and a glass balustrade overlooking a cityscape.

A modern outdoor seating area with a checkered floor, black chairs, a round table, and yellow planters with greenery.

A hotel room with a bed, a desk, a chair, a window with curtains, and a view of the sea.

20. The Pal Living in a Concept

Heraklion

Jennifer

AU$143

includes taxes & fees

2 Oct - 3 Oct

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Top Ayios Thomas Hotel Reviews

Recent Reviews in Ayios Thomas

Mirabello Hotel

8/10 Good

"I have stayed here before and have felt quite satisfied with my experience. It is a favorite of mine."

GDM Megaron Historical Monument Hotel

10/10 Excellent

"Great hotel. Heraklion isn’t the nicest city for tourists, but the hotel is excellent. Everything was in great shape, spotlessly clean and the service was great. More of a business hotel than a tourist location, but the standards are high. Breakfast was excellent too. All staff were really helpful."

Agapi Beach Resort - Premium All Inclusive

10/10 Excellent

"Incredibly clean, all staff were exceptional. A few different pools which were all quiet and very easy to get a sunbed. Beach and sunbeds also really clean, beach bar is great for snacks and drinks. The food is the real stand out, exceeded expectations massively. Every meal was amazing. House wine/beer is pretty average, beer especially bad in the small plastic day cups. But there is a shop on site and more shops opposite which sell various Greek beers for €1 each, Nissos was really good. Great hotel, would definitely recommend."

Marvel Deluxe Rooms

8/10 Good

".."

Sofia Hotel

8/10 Good

"Près de l’aéroport et de l’arrêt d’autobus à proximité 😏"

Ibis Styles Heraklion Central

10/10 Excellent

"Staff very helpful."

Aquila Atlantis Hotel

10/10 Excellent

"Hotel was beautiful and in a great location to the port, old town etc. Also had free parking which was a nice bonus. We spent a lot of time in the pool which was much needed respite from the heat. Only items to improve here was a bit of a disconnect between the day reception staff and the night reception staff re: our request for late checkout. Night staff said yes, then the next day, the day staff said no - so it made us scramble last minute to pack everything up. Otherwise - a great stay and would recommend!"

Peninsula Resort & Spa - All Inclusive

10/10 Excellent

"The staff was accommodating if you didn’t speak their language, they had interpreted for you. The rooms were very clean. The spa was excellent. I have nothing to compare with yet. I had a good time I would visit again."

Infinity City Boutique Hotel

10/10 Excellent

"Excellent hotel within walking distance of the port for our short stop over in Heraklion . Staff very helpful and allowed us to have early breakfast before our ferry ."

More cheap accommodation in Ayios Thomas

Pela Mare Hotel

Agia Pelagia Malevizi Crete Island

AU$93

13 Oct - 14 Oct

includes taxes & fees

Mirabello Hotel

20 Theotokopoulou St Heraklion Crete Island

AU$96

13 Oct - 14 Oct

includes taxes & fees

8.6/10 Excellent! (405 reviews)

Thalia Bloom Villa Apartments

Marikas Kapsi Malevizi Heraklion

AU$110

2 Oct - 3 Oct

includes taxes & fees

9.4/10 Exceptional! (30 reviews)

Idi Hotel

Zaros Faistos Crete

AU$126

26 Sept - 27 Sept

includes taxes & fees

9.2/10 Wonderful! (85 reviews)

El Greco Hotel

4, Street 1821 Heraklion Crete Island

AU$127

2 Oct - 3 Oct

includes taxes & fees

7.4/10 Good! (815 reviews)

Kronos Hotel

2, Sof. Venizelou Str. and M. Agarathou Heraklion Crete Island

AU$129

7 Oct - 8 Oct

includes taxes & fees

8.8/10 Excellent! (647 reviews)

Frequently asked questions

What is the best area to stay in Ayios Thomas?

The best area to stay in Ayios Thomas is within the village itself, particularly around the central square and the main roads leading off it.This traditional Cretan village offers a genuine experience, with its narrow, winding streets, historic churches, and local tavernas. Key landmarks include the Church of Ayios Thomas and the ancient Roman aqueduct, which are easily accessible on foot. The village is compact and can be explored comfortably, offering a sense of local life.Couples looking for a peaceful retreat will find Ayios Thomas ideal. The quiet pace of life, combined with opportunities for scenic walks through the olive groves and vineyards surrounding the village, makes it superb for relaxation. Evenings can be spent enjoying authentic Cretan cuisine at the local tavernas, often with live music.For travellers interested in local culture and history, staying in Ayios Thomas provides direct access to its historic sites and the opportunity to interact with the local community.

When is the best time to go to Ayios Thomas?

The best time to go to Ayios Thomas is during late spring (May to early June) or early autumn (September to October) for pleasant weather and fewer crowds.During these shoulder seasons, the weather is warm and sunny, with average temperatures ranging from 20°C to 26°C, making it ideal for exploring the natural beauty of the area and enjoying the beaches without the intense heat of mid-summer. The sea is also warm enough for swimming, and the quieter atmosphere allows for a more relaxed experience.Couples looking for a romantic getaway will appreciate the serene environment and the opportunity to enjoy leisurely walks, explore local villages, and dine alfresco without the bustling crowds. This period also offers excellent conditions for hiking and visiting archaeological sites, as the temperatures are comfortable for outdoor activities.For families with young children, these months are particularly suitable as the milder temperatures are more agreeable for little ones, and the beaches are less crowded, offering a more relaxed setting for play.

Can I cancel my hotel reservation on Expedia?

You can cancel your hotel reservation on Expedia, though it depends on the cancellation policy of your booking. Most bookings are refundable if cancelled within 24-48 hours of the scheduled arrival. Be sure to check your booking confirmation for the exact cancellation policy. If free cancellation is available, you can cancel directly through your Expedia account by logging in, going to "My Trips", and selecting your reservation. To find flexible deals, filter your search by "Fully refundable property" for hotels in Ayios Thomas.

How can I save on a hotel booking in Ayios Thomas with Expedia?

One Key™—Expedia's free travel rewards program—gives you instant access to discounts with Member Prices on Ayios Thomas hotels. Plus, you'll earn OneKeyCash™* on eligible bookings to use on future trips. Booking an Expedia hotel and flight package is another great way to save, where bundling can result in significant savings. *Excludes taxes and fees. OneKeyCash is not redeemable for cash and can only be used on Expedia and other participating brands.

How much is the nightly rate for a hotel in Ayios Thomas?

Prices for hotels in Ayios Thomas often vary, but you can find a great deal from AU$56 on Expedia. All sorts of factors affect price, such as the time of year or the days of the week you choose for your stay. Find the best deals by being flexible with your dates, and sort search results by "Price: low to high" for our cheapest rates.

Explore a world of travel with Expedia

Activities in Heraklion

Search Ayios Thomas hotels

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Ayios Thomas

Check prices for these dates

Filter by

Property class

Guest rating

Our top choices for Ayios Thomas hotels

1. Idi Hotel

2. Traditional Cretan Houses

3. Aetovigla Traditional Guest Houses

4. Manili Boutique Suites & Villas, an SLH Hotel

5. Eliathos Hillside Retreat

6. Sofia Hotel

7. Chapter 02 Gallery Suites

8. Stay 365 Heraklion Apart Hotel

9. Asterion Hotel

10. Karteros Hotel

11. Marvel Deluxe Rooms

12. Porta Medina Boutique Hotel - Adults Only

13. RoccaMare Heraklion - Handwritten Collection

14. Ibis Styles Heraklion Central

15. GDM Megaron Historical Monument Hotel

16. Anesea City

17. 3 Pines Design Living

18. Galaxy Hotel Iraklio

19. Kronos Hotel

20. The Pal Living in a Concept

Top Ayios Thomas Hotel Reviews

Recent Reviews in Ayios Thomas

Mirabello Hotel

GDM Megaron Historical Monument Hotel

Agapi Beach Resort - Premium All Inclusive

Marvel Deluxe Rooms

Sofia Hotel

Ibis Styles Heraklion Central

Aquila Atlantis Hotel

Peninsula Resort & Spa - All Inclusive

Infinity City Boutique Hotel

More cheap accommodation in Ayios Thomas

Pela Mare Hotel

Mirabello Hotel

Thalia Bloom Villa Apartments

Idi Hotel

El Greco Hotel

Kronos Hotel

Frequently asked questions

Explore a world of travel with Expedia

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