Search Junction City hotels

    calendar shield illustration

    Change your mind

    Book hotels with free cancellation
    deals illustration

    Treat yourself

    Sign in to save 10% or more on thousands of hotels
    bed illustration

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

Filter by

Guest rating
Guest rating
Property class

Top hotels and accommodation in Junction City

Madison Inn Lodge

2.5 star property
7.6 out of 10, Good, (286)
"Close to Hwy 67 in Fredericktown, Mo. Internet access was good. Quiet overall. I needed to get up very early to be somewhere at 6 am and able to get up, shower and out the door without any delays."
The price is AU$147
includes taxes & fees
17 Aug - 18 Aug
Madison Inn Lodge

Baymont Inn and Suites by Wyndham Farmington, MO

2.5 star property
8.0 out of 10, Very good, (1000)
"everything about the hotel was great. some guest were loud at times when trying to sleep but besides that it was a great stay! "
The price is AU$94
includes taxes & fees
21 Aug - 22 Aug
Baymont Inn and Suites by Wyndham Farmington, MO

Super 8 by Wyndham Farmington

2.0 star property
8.0 out of 10, Very good, (577)
"Very friendly staff who make sure guests are taken care of! Clean, great location, and safe place to stay. "
The price is AU$100
includes taxes & fees
19 Aug - 20 Aug
Super 8 by Wyndham Farmington

Hampton Inn Farmington

2.5 star property
8.8 out of 10, Excellent, (497)
"Very clean"
The price is AU$259
includes taxes & fees
24 Aug - 25 Aug
Hampton Inn Farmington

Quality Inn Farmington

2.5 star property
7.6 out of 10, Good, (830)
"Great place for passing through, rooms were clean"
The price is AU$94
includes taxes & fees
7 Sept - 8 Sept
Quality Inn Farmington

Crown Pointe Lodge, BW Signature Collection

2.5 star property
9.0 out of 10, Wonderful, (542)
"Clean, quiet, great staff."
The price is AU$235
includes taxes & fees
21 Aug - 22 Aug
Crown Pointe Lodge, BW Signature Collection

Holiday Inn Express & Suites Farmington by IHG

2.5 star property
8.6 out of 10, Excellent, (409)
"Great hotel"
The price is AU$442
includes taxes & fees
5 Sept - 6 Sept
Holiday Inn Express & Suites Farmington by IHG

Arcadia Academy

3.0 star property
9.8 out of 10, Exceptional, (7)
"We really enjoyed our stay. Great food and the staff was the nicest/ friendliest I have ever had the pleasure of meeting. "
The price is AU$227
includes taxes & fees
17 Aug - 18 Aug
Arcadia Academy
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Stay near top Junction City attractions

Millstream Gardens Conservation Area

Millstream Gardens Conservation Area

Explore the great outdoors at Millstream Gardens Conservation Area, a lovely green space in Fredericktown. While you're in the area, wander around the natural setting.

Learn more about Junction City

Head to Twin Oaks Vineyard & Winery and Madison County Courthouse—just two of the sights around Junction City.

Top Junction City Hotel Reviews

Frequently asked questions

Where is the best place for a stay in Junction City?

Baymont Inn and Suites by Wyndham Farmington, MO, located 16.2 mi (26 km) from the heart of Junction City, is a top choice for your stay, based on our traveller data. Two other choices for your visit to the area are Silo Farm Haus- located in the heart of wine country! and Super 8 by Wyndham Farmington. See all available top hotels, or vacation rentals in Junction City.

What are some of the best holiday rentals that Junction City has to offer?

Missouri Castle w/ Private Lake, Pool & 100 Acres!: This holiday home rental outside of Junction City is located on a lake, and has a patio, a garden and a BBQ to put you at ease in your new surroundings. It has 7 bedrooms, as well as a kitchen with a dishwasher, a fridge and a stovetop, so that you can cook with friends or family. You and your friends and family can relax into your holiday with amenities such as a selection of games. See all vacation rentals in Junction City.

If I need to cancel my hotel reservation in Junction City, will I receive a refund?

Yes! Most room reservations are fully refundable as long as you cancel before the hotel’s cancellation deadline, which often is within 24-48 hours of check in. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Junction City.

What are some hotels with pools in Junction City?

Quality Inn Farmington: Features a snack bar, an indoor pool and free buffet breakfast. Hampton Inn Farmington and Holiday Inn Express & Suites Farmington, an IHG Hotel are two additional hotels that feature an on-site pool. View all hotels with pools in Junction City.

What is staying in Junction City like?

Visitors to Junction City will definitely find plenty to explore and enjoy. There are 74 hotels and other accommodation options in the surrounding area. Find out more about Junction City.

What is there to see in Junction City?

Places to visit in the wider area include Twin Oaks Vineyard & Winery, Crown Valley Winery and Pickle Springs Natural Area. You'll also find Hawn State Park and Madison County Courthouse in the area. Take a look at what more there is to see and do in Expedia's Junction City guide.

What's the seasonal weather in Junction City?

The hottest months are usually July and August, with an average temperature of 24°C, while the coldest months are January and February, with an average of 4°C. Average annual precipitation for Junction City is 1411 mm.