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Our top choices for Clayton hotels

Chateau Country Inn

Chateau Country Inn
2.0 star property
Clayton
9.6 out of 10, Exceptional, (150 reviews)
"We had a unique and comfortable stay at Chateau Country Inn! The check-in and check out processes were smooth. The room was clean, and the bed was comfortable. Breakfast in the morning was complimentary, served at the advertised time, and was enjoyable! Overall, we had a very nice stay."
United States
Alicia
The price is AU$192
includes taxes & fees
28 June - 29 June
Chateau Country Inn

West Winds Motel & Cottages

West Winds Motel & Cottages
2.5 star property
Clayton
9.2 out of 10, Wonderful, (165 reviews)
"Easy check in Beautiful location right on the River. "
Canada
Nancy
The price is AU$168
includes taxes & fees
10 June - 11 June
West Winds Motel & Cottages

The Clipper Inn

The Clipper Inn
3.0 star property
Clayton
8.4 out of 10, Very good, (286 reviews)
"Room was clean and the beds were comfortable"
United States
Jason
The price is AU$170
includes taxes & fees
11 June - 12 June
The Clipper Inn

1000 Islands Harbor Hotel

1000 Islands Harbor Hotel
3.5 star property
Clayton
9.2 out of 10, Wonderful, (1,005 reviews)
"The room was very clean, staff helpful and the restaurant was excellent."
United States
April
The price is AU$329
includes taxes & fees
24 June - 25 June
1000 Islands Harbor Hotel

Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY
2.5 star property
Watertown
8.0 out of 10, Very good, (1,038 reviews)
"very quiet place"
Canada
Richard
The price is AU$105
includes taxes & fees
11 June - 12 June
Ramada by Wyndham Watertown/Thousand Islands NY

Capt.'s Inn & Suites

Capt.'s Inn & Suites
2.0 star property
Alexandria Bay
8.8 out of 10, Excellent, (1,002 reviews)
"Very nice quiet little place to stay"
United States
Amanda
The price is AU$112
includes taxes & fees
7 June - 8 June
Capt.'s Inn & Suites

The Roxy Cape Vincent

The Roxy Cape Vincent
2.5 star property
Cape Vincent
9.0 out of 10, Wonderful, (45 reviews)
"Great location for our trip. "
United States
Andrew
The price is AU$222
includes taxes & fees
10 June - 11 June
The Roxy Cape Vincent

Nest Inn

Nest Inn
2.0 star property
Watertown
8.0 out of 10, Very good, (79 reviews)
"Excellent room for the price. We had no problems with anything. Will probably stay here again."
United States
Betsy
The price is AU$89
includes taxes & fees
10 June - 11 June
Nest Inn

Allen's Budget Motel

Allen's Budget Motel
2.5 star property
Watertown
8.8 out of 10, Excellent, (249 reviews)
"Stay was very comfortable and the staff was excellent "
United States
Randall
The price is AU$93
includes taxes & fees
14 June - 15 June
Allen's Budget Motel

Rock Ledge Motel

Rock Ledge Motel
2.5 star property
Alexandria Bay
9.2 out of 10, Wonderful, (266 reviews)
"Nice place, we would stay there again. Quiet, clean, friendly. "
United States
Helinka
The price is AU$118
includes taxes & fees
10 June - 11 June
Rock Ledge Motel

Capt. Thomson's Resort

Capt. Thomson's Resort
3.0 star property
Alexandria Bay Downtown
9.4 out of 10, Exceptional, (1,008 reviews)
"Great place to stay"
United States
Harry
The price is AU$215
includes taxes & fees
17 June - 18 June
Capt. Thomson's Resort

The GillHouse

The GillHouse
2.0 star property
Henderson Harbor
9.6 out of 10, Exceptional, (8 reviews)
"Great stay"
United States
Kerry
The price is AU$221
includes taxes & fees
7 June - 8 June
The GillHouse

Bonnie Castle Resort & Marina

Bonnie Castle Resort & Marina
3.0 star property
Alexandria Bay Downtown
7.0 out of 10, Good, (1,000 reviews)
"Good place"
Canada
Dr. Adeel
The price is AU$186
includes taxes & fees
14 June - 15 June
Bonnie Castle Resort & Marina

Days Inn by Wyndham Watertown Fort Drum

Days Inn by Wyndham Watertown Fort Drum
2.0 star property
Calcium
8.8 out of 10, Excellent, (1,007 reviews)
"Great hotel honestly one of our favorites"
United States
Chris
The price is AU$128
includes taxes & fees
14 June - 15 June
Days Inn by Wyndham Watertown Fort Drum

Royal Inn Motel

Royal Inn Motel
2.0 star property
Watertown
7.2 out of 10, Good, (422 reviews)
"Always a good value for the money. Family-run business with high priority placed on guests' needs. Staff is great. Much nicer folks than at other "budget" options in the area. Rooms are clean. Beds are comfy. Heating & AC work well, as do the appliances. We will stay again when in that area. Great alternative to impersonal chain motels & hotels."
United States
Cynthia C.
The price is AU$118
includes taxes & fees
10 June - 11 June
Royal Inn Motel

Hampton Inn Watertown

Hampton Inn Watertown
2.5 star property
Watertown
9.0 out of 10, Wonderful, (1,001 reviews)
"Staff was friendly, breakfast was great, everything was clean. Will definitely stay there again when we stay in Watertown to travel up north."
United States
Sarah
The price is AU$182
includes taxes & fees
28 June - 29 June
Hampton Inn Watertown

Travel Inn

Travel Inn
2.0 star property
Watertown
6.8 out of 10, (20 reviews)
"Bed was comfortable. "
Canada
Karen
The price is AU$107
includes taxes & fees
21 June - 22 June
Travel Inn

Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands
2.5 star property
Watertown
8.4 out of 10, Very good, (1,030 reviews)
"It was convenient for our purpose, and was nice. Breakfast was meh."
United States
William
The price is AU$183
includes taxes & fees
5 July - 6 July
Comfort Inn & Suites Watertown - 1000 Islands

Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum
2.5 star property
Calcium
8.4 out of 10, Very good, (1,004 reviews)
"Good location to visit Ft. Drum. Nice stay, only down is the very limited breakfast. Would stay there again."
United States
Sheldon
The price is AU$133
includes taxes & fees
14 June - 15 June
Quality Inn & Suites Watertown Fort Drum

Riveredge Resort

Riveredge Resort
3.5 star property
Alexandria Bay Downtown
8.4 out of 10, Very good, (1,000 reviews)
"A beautiful place to visit."
United States
John
The price is AU$257
includes taxes & fees
14 June - 15 June
Riveredge Resort
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Stay near popular Clayton attractions

Learn more about Clayton

Nestled along the St. Lawrence River, this charming village invites you to explore its historic city centre and scenic waterfront. Cruise the Thousand Islands, visit Boldt Castle on Heart Island, or cast a line for bass in one of Clayton's many fishing spots.

Clayton, NY, USA - 02-09-2025:  Winter aerial image Clayton, NY along a frozen St Lawrence River

Top Clayton Hotel Reviews

More cheap accommodation in Clayton

Frequently asked questions

Where is the best place to stay in Clayton?
1000 Islands Harbor Hotel is one of the top choices for your stay based on our traveller data. This hotel offers a restaurant and an indoor pool. Other good choices for your visit include Chateau Country Inn and The Clipper Inn. See all available top hotels, or vacation rentals in Clayton.
What are some of the best holiday rentals that Clayton has to offer?
Charming Historic House 4 Blocks from Riverfront in Village of Clayton: This highly rated holiday home rental in Clayton comes with air conditioning so that you can feel at home during your trip. Other favourite homes for rent in Clayton are Waterfront 5 Bedroom Grindstone Island Farmhouse and Located in the heart of the Thousand Islands, directly across from ClaytonNY. See all vacation rentals in Clayton.
If I need to cancel my hotel reservation in Clayton, will I receive a refund?
Yes, the majority of room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which often is within 24-48 hours of check in. If you have a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Clayton.
What's the best dog-friendly place to stay in Clayton?
The Clipper Inn is a top dog-friendly inn, and offers a restaurant along with free WiFi for its human guests. West Winds Motel & Cottages is another option for a stay with your pet. See more pet-friendly hotel accommodations in Clayton.
What's the best accommodation for a golf trip to Clayton?
The Clipper Inn is a top inn that has an adjacent golf course and features free WiFi. Another good choice is Wooden Boat Inn if you'd like to be close to a golf course while in town. You can tee off at C-Way Golf Course during your trip. See more golf hotels in Clayton.
What are some accommodation options with pools in Clayton?
1000 Islands Harbor Hotel: Features free self parking, an indoor pool and complimentary wireless Internet access. Another option that features an on-site pool is West Winds Motel & Cottages. View all hotels with pools in Clayton.
What's it like staying in Clayton?
Visitors to Clayton will definitely enjoy the riverfront. Tourists can also enjoy so much more including its coffee shops. In Clayton, there are 121 hotels and other accommodation options to choose from. Find out more about Clayton.
What is there to see in Clayton?
Cultural venues include The Clayton Opera House, Thousand Islands Museum and Antique Boat Museum. Natural beauty is on display at Lake Ontario, Grenell Island and Blind Bay. A couple of additional sights to add to your itinerary are 1000 Islands River Rat Cheese and Clayton Marina. Take a look at what more there is to see and do in Expedia's Clayton guide.
What's the seasonal weather like in Clayton?
The hottest months are usually July and August, with an average temperature of 19°C, while the coldest months are January and February, with an average of -3°C. The snowiest months in Clayton are January, February, March and November, with each month seeing an average of 47 cm of snowfall.

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