Search San Juan Island hotels

Most accommodation are fully refundable. Because flexibility matters.

Save an average of 15% on thousands of hotels with Expedia Rewards

Search over 2.9 million properties and 550 airlines worldwide

Check San Juan Island hotel prices

Tomorrow night
This weekend
Next weekend

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Property class
Payment type
Payment type
Property type
Property type
Area
Area
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveller experience
Traveller experience

Top hotels and accommodation in San Juan Island

Majestic Inn & Spa
4.0 star property
9.2 out of 10, Wonderful, (1001)
"Great property!"
The price is AU$267
includes taxes & fees
6 May - 7 May
Majestic Inn & Spa
Friday Harbor Suites
2.5 star property
8.2 out of 10, Very good, (761)
"Large rooms, very clean , very quiet. Cafe was excellent !"
The price is AU$293
includes taxes & fees
15 May - 16 May
Friday Harbor Suites
Anacortes Ship Harbor Inn
3.0 star property
8.8 out of 10, Excellent, (1000)
"My husband and I loved staying at the Ship Harbor Inn because the room was so big, clean, quiet, and pretty. We had a view of the water and could watch the ferry go in and out. Everyone who worked there was so friendly. I am looking forward to bringing my relatives there."
The price is AU$204
includes taxes & fees
5 May - 6 May
Anacortes Ship Harbor Inn
Save an average of 15% on thousands of hotels when you're signed in
Earthbox Inn & Spa
2.5 star property
8.6 out of 10, Excellent, (782)
"Great location kids enjoyed the indoor pool."
The price is AU$359
includes taxes & fees
2 May - 3 May
Earthbox Inn & Spa
Anaco Bay Inn
2.0 star property
8.2 out of 10, Very good, (996)
"We were impressed by the caring and accommodating treatment we received. The building has a dated but comfortable feel. "
The price is AU$169
includes taxes & fees
2 May - 3 May
Anaco Bay Inn
The Marina Inn
2.5 star property
9.2 out of 10, Wonderful, (1000)
"Very nice with good service and clean, Helpful staff 24/7 and the hotel is close to restaurants and other activities."
The price is AU$214
includes taxes & fees
13 May - 14 May
The Marina Inn
Sunrise Inn Villas and Suites
2.0 star property
8.4 out of 10, Very good, (531)
"Amazing staff, clean and quiet"
The price is AU$180
includes taxes & fees
12 May - 13 May
Sunrise Inn Villas and Suites
Snug Harbor Resort
2.5 star property
9.8 out of 10, Exceptional, (282)
"It's a great place for a quiet and relaxing vacation! if you love to stay in the nature and want to avoid those busy areas from Friday Harbor, this is the place! The 2-bedroom cabin was neat and clean, filled with kitchenware (3-bedroom cabin includes dish washer!!) and a grill. Staffs are definitely helpful and friendly! We really enjoy our 3-night stay there!"
The price is AU$433
includes taxes & fees
2 May - 3 May
Snug Harbor Resort
Bird Rock Hotel
2.0 star property
8.8 out of 10, Excellent, (308)
"Cool old building with modern updates. The remote check in was clear and smooth.We received a couple texts from staff checking in during our stay, so it still felt very personable. Would highly recommend."
The price is AU$282
includes taxes & fees
7 May - 8 May
Bird Rock Hotel
The Orca Inn
2.0 star property
7.6 out of 10, Good, (787)
"Very clean, friendly staff, walking distance from ferry, supermarket right next door. Good value for money. "
The price is AU$168
includes taxes & fees
5 May - 6 May
The Orca Inn
Lopez Islander Resort
3.5 star property
8.4 out of 10, Very good, (257)
"Was nice. Splendid view"
The price is AU$339
includes taxes & fees
2 May - 3 May
Lopez Islander Resort
Tucker House Inn
4.0 star property
9.4 out of 10, Exceptional, (213)
"Last minute reservation. Such a great time and location. Would definitely recommend!"
The price is AU$382
includes taxes & fees
9 May - 10 May
Tucker House Inn
Friday Harbor House
3.5 star property
9.6 out of 10, Exceptional, (188)
"Beautiful property with unique touches. Great view. "
The price is AU$665
includes taxes & fees
2 May - 3 May
Friday Harbor House
West Beach Resort
3.5 star property
9.2 out of 10, Wonderful, (81)
"We loved our cabin with a view of the water. Kitchen was stocked with spices, oil, coffee, pots and pans and dishes - everything we needed. Fireplace was toasty with free firewood. We’ll be back!"
The price is AU$459
includes taxes & fees
2 May - 3 May
West Beach Resort
The Edenwild Boutique Inn
2.5 star property
9.4 out of 10, Exceptional, (204)
"I’m in room number five. I would work on the lighting. It’s very glaring. A lamp or two would be great."
The price is AU$221
includes taxes & fees
5 May - 6 May
The Edenwild Boutique Inn
Deer Harbor Inn
3.0 star property
8.2 out of 10, Very good, (142)
"Adorable cabin, with cozy rooms. Matthew’s Smokehouse in the back of the property was delicious! Would definitely recommend as a great place to stay while you’re on Orcas. "
The price is AU$367
includes taxes & fees
2 May - 3 May
Deer Harbor Inn
Trumpeter Inn
3.0 star property
9.8 out of 10, Exceptional, (185)
"Claudia was a great host and has a beautiful and surreal place. Would love to stop by again if we’re in town "
The price is AU$340
includes taxes & fees
2 May - 3 May
Trumpeter Inn
Nantucket Inn
3.5 star property
9.8 out of 10, Exceptional, (495)
"Delightful room; great amenities. The home baked cookies were a very nice touch. "
The price is AU$285
includes taxes & fees
14 May - 15 May
Nantucket Inn
Kingfish at West Sound
3.5 star property
9.6 out of 10, Exceptional, (81)
"I loved the view, the lovely private balcony, the cozy room and decor. I would definitely stay again. The management were very responsive and helpful as well. The electric fireplace is also a cozy addition that I made good use of since it is pretty cold in March, still."
Kingfish at West Sound
Friday Harbor Grand B&B
3.0 star property
9.6 out of 10, Exceptional, (121)
"Excellent B&B. Wonderful hosts. "
Friday Harbor Grand B&B
Don't see what you're looking for?
See all available properties in San Juan Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

More cheap accommodation in San Juan Island

Stay near top San Juan Island attractions

Recent Reviews in San Juan Island
Expedia verified reviews